HHpred
From MetaBase
Text from the NAR 2007 Web Server Issue (Web Server Summaries) by permission of Oxford University Press.
HHpred is NAR Web Server Collection No. 1137.
Web Server Description
Based on the comparison of profile HMMs, HHpred takes a protein sequence or multiple sequence alignment as input and searches for remote homologues in an assortment of databases such as PDB, SMART and Pfam. The user can select either a local or global alignment method, and the search results can be used to generate 3D structural models.
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